Breakfast Egg Muffins

Featured in: Everyday Table Meals

Whisk together eggs and milk, then fold in shredded cheddar, diced bell peppers, onions, and crumbled bacon. Season with salt, pepper, garlic powder, and paprika. Pour into a greased muffin tin and bake at 350°F for 18-20 minutes until set and golden. Let cool briefly before serving. These muffins store beautifully in the fridge for up to 5 days and reheat perfectly in the microwave.

Updated on Sun, 01 Feb 2026 08:50:00 GMT
Golden-brown Breakfast Egg Muffins with melted cheddar cheese, crumbled bacon, and colorful bell peppers, served warm for a quick morning meal. Save
Golden-brown Breakfast Egg Muffins with melted cheddar cheese, crumbled bacon, and colorful bell peppers, served warm for a quick morning meal. | platerelay.com

One Sunday morning, I opened the fridge to find leftover bacon, half a bell pepper, and a carton of eggs staring back at me. I had twenty minutes before everyone woke up and I wanted something more exciting than scrambled eggs. That's when I grabbed the muffin tin and started cracking eggs into a bowl, tossing in whatever looked good. The kitchen smelled like a diner by the time they baked, and those little golden cups disappeared faster than I could cool them.

I started making these every weekend after my neighbor mentioned she never had time for breakfast. I brought her a container of six, still warm, and she texted me two days later asking for the recipe. Now we swap variations, she does spinach and feta, I stick with bacon and cheddar. It turned into this unspoken Sunday tradition where we both meal prep and trade one muffin tin for another.

Ingredients

  • Large eggs: The foundation of the whole muffin, whisked until slightly frothy so they bake up light and fluffy instead of dense.
  • Milk: Just half a cup makes the eggs tender and creamy, not rubbery, and helps everything blend smoothly in the bowl.
  • Shredded cheddar cheese: Melts into golden pockets throughout each muffin and adds a sharp, salty richness that balances the vegetables.
  • Diced bell peppers: I use red or yellow for sweetness and a pop of color, diced small so they distribute evenly and cook through.
  • Diced onions: They soften in the oven and add a subtle savory note without overpowering the eggs.
  • Cooked and crumbled bacon: Crispy bits in every bite, though sausage or even diced ham work just as well if that is what you have on hand.
  • Salt, black pepper, garlic powder, and paprika: A simple seasoning blend that wakes up the eggs and ties all the flavors together without fuss.
  • Cooking spray or olive oil: Greasing the muffin tin well is the difference between muffins that pop out clean and ones you have to pry loose with a knife.

Instructions

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Preheat and Prep:
Set your oven to 350°F and grease every cup of a 12-cup muffin tin generously with cooking spray or a light brush of olive oil. Do not skip this step or you will be chiseling out stuck eggs later.
Whisk the Base:
Crack the eggs into a large bowl and pour in the milk, then whisk hard until the mixture is frothy and well combined. This aeration helps the muffins puff up nicely in the oven.
Stir in the Fillings:
Add the cheddar, bell peppers, onions, bacon, salt, pepper, garlic powder, and paprika directly into the egg mixture. Stir everything together until evenly distributed so each muffin gets a little bit of everything.
Fill the Tin:
Pour the mixture into each muffin cup, filling them about two thirds full to leave room for the eggs to rise. I use a ladle or a measuring cup with a spout to keep things tidy.
Bake Until Golden:
Slide the tin into the oven and bake for 18 to 20 minutes, until the tops are set and lightly golden. A toothpick poked in the center should come out clean, not wet.
Cool and Release:
Let the muffins rest in the tin for 5 minutes so they firm up and release easier. Run a butter knife around the edges if any stick, then lift them out gently.
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The first time I packed these for a road trip, my kids argued over who got the last one before we even left the driveway. Now I double the batch and freeze half, because apparently egg muffins have become the ultimate peace offering on long car rides. They reheat in seconds and no one complains about breakfast anymore.

How to Store and Reheat

Once completely cooled, stack the muffins in an airtight container with a sheet of parchment between layers if you are feeling fancy. They keep in the fridge for up to five days and taste just as good reheated in the microwave for 30 seconds. For longer storage, wrap each muffin individually in plastic wrap and freeze them in a freezer bag for up to three months, then thaw overnight in the fridge before reheating.

Variations Worth Trying

I have made these with crumbled sausage instead of bacon, stirred in handfuls of spinach, swapped cheddar for crumbled feta, and even added diced tomatoes when I had them. The base recipe is forgiving, so treat it like a template and use whatever vegetables, cheese, or cooked meat you have lingering in the fridge. Just keep the total add ins around two cups so the eggs still set properly.

Serving Suggestions

These muffins are perfect on their own, but I love serving them with a dollop of salsa, a drizzle of hot sauce, or even a smear of avocado on the side. They pair well with fresh fruit, a handful of greasy hash browns, or just a strong cup of coffee.

  • Top with a spoonful of sour cream and chives for a loaded baked potato vibe.
  • Serve alongside a simple green salad for a light lunch instead of breakfast.
  • Pack them in lunchboxes with cherry tomatoes and cucumber slices for an easy protein hit.
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A close-up view of savory Breakfast Egg Muffins packed with diced onions and peppers, resting on a rustic wooden board for a cozy kitchen vibe. Save
A close-up view of savory Breakfast Egg Muffins packed with diced onions and peppers, resting on a rustic wooden board for a cozy kitchen vibe. | platerelay.com

There is something quietly satisfying about pulling a warm egg muffin from the fridge on a Tuesday morning and knowing you already won breakfast. Make a batch this weekend and thank yourself all week long.

Recipe FAQs

Can I make these egg muffins ahead of time?

Yes, these muffins are perfect for meal prep. Cool completely and store in an airtight container in the refrigerator for up to 5 days. Reheat in the microwave for 30-60 seconds before serving.

Can I freeze breakfast egg muffins?

Absolutely! Freeze cooled muffins in a freezer-safe bag for up to 3 months. Thaw overnight in the refrigerator and reheat before eating.

What vegetables work well in these muffins?

Bell peppers, onions, spinach, mushrooms, diced tomatoes, and shredded zucchini all work beautifully. Just be sure to dice vegetables finely and drain any excess moisture before adding.

How do I prevent muffins from sticking to the tin?

Generously grease each cup with cooking spray or olive oil. Letting the muffins cool for 5 minutes before removing also helps them release more easily.

Can I make these vegetarian?

Yes! Simply omit the bacon or sausage and add extra vegetables like spinach, mushrooms, or diced tomatoes. You can also incorporate vegetarian sausage crumbles or plant-based bacon alternatives.

Breakfast Egg Muffins

Handheld breakfast muffins loaded with eggs, cheese, bacon, and veggies for easy mornings.

Time to Prep
10 minutes
Time to Cook
20 minutes
Total Duration
30 minutes
Created by Henry Foster

Recipe Category Everyday Table Meals

Skill Level Easy

Cuisine American

Makes 5 Portions

Dietary Details No Gluten, Low Carb

Ingredient List

Eggs & Dairy

01 6 large eggs
02 1/2 cup whole milk
03 1/2 cup shredded cheddar cheese

Vegetables

01 1/2 cup diced bell peppers (red, green, or yellow)
02 1/2 cup diced onions

Proteins

01 1/2 cup cooked and crumbled bacon

Seasonings

01 1/2 teaspoon salt
02 1/4 teaspoon black pepper
03 1/4 teaspoon garlic powder
04 1/4 teaspoon paprika

For Greasing

01 Cooking spray or olive oil for muffin tin

Directions

Step 01

Preheat Oven: Set oven to 350°F (175°C) and allow to fully preheat.

Step 02

Prepare Muffin Tin: Grease a standard 12-cup muffin tin with cooking spray or olive oil, ensuring all surfaces are evenly coated.

Step 03

Combine Eggs and Milk: In a large mixing bowl, whisk together 6 eggs and 1/2 cup milk until well combined and slightly frothy, approximately 1-2 minutes.

Step 04

Blend Ingredients: Stir in cheddar cheese, bell peppers, onions, bacon, salt, black pepper, garlic powder, and paprika until evenly distributed throughout the mixture.

Step 05

Fill Muffin Cups: Distribute the egg mixture into prepared muffin cups, filling each approximately 2/3 full to allow for rising during baking.

Step 06

Bake Muffins: Bake for 18-20 minutes until muffins are set and lightly golden. Insert a toothpick in the center; it should come out clean when done.

Step 07

Cool and Remove: Remove from oven and allow to cool for 5 minutes. Carefully loosen edges with a knife and remove muffins from tin.

Step 08

Serve or Store: Serve warm immediately or cool completely before transferring to an airtight container for refrigeration up to 5 days. Reheat in microwave before serving.

Equipment Needed

  • 12-cup muffin tin
  • Large mixing bowl
  • Whisk
  • Measuring cups and spoons
  • Knife and cutting board

Allergy Advice

Always check every ingredient for potential allergens. Ask your doctor if you're unsure.
  • Contains eggs and dairy (milk/cheese)
  • May contain pork depending on bacon or sausage selection
  • Verify gluten-free status of processed ingredients such as sausage

Nutrition Info (per serving)

For reference only—please consult a nutritionist or healthcare provider for dietary advice.
  • Caloric Value: 150
  • Fat Content: 10 grams
  • Carbohydrate: 2 grams
  • Proteins: 11 grams